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napari Plugin for Phasor Analysis in Hyperspectral Images

Award napari Plugin Foundation

Project Summary

Hyperspectral imaging (HSI) is essential in confocal microscopy, with agricultural and industrial applications. However, analyzing HSI data can be challenging, demanding command of both scientific knowledge and software. 

This project will develop a Phasor plot plugin for napari, which will perform phasor analysis on microscopy HSI. The plugin’s simple rules and straightforward approach will enable cell biologists to quantify and segment cells and tissues according to their fluorescence spectrum at the single-pixel level. The plugin will also allow users to interact and manipulate data without software programming knowledge. 


Principal Investigator
Leonel Malacrida, PhD
Leonel Malacrida, PhD
Co-Principal Investigator
Bruno Schuty
Bruno Schuty