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Building Robust Image Registration

Award napari Plugin Accelerator

Project Summary

StackReg/TurboReg are popular plugins for the alignment of series of images required in time-dependent microscopy to correct for sample drift and in multicolor super resolution microscopy to align the different color channels. These plugins are written in Java for the image processing software Fiji/ImageJ, one of the most widely used open source image analysis tools in life sciences.

To expand access to these tools, this project will port the pyStackReg package, a standalone Python package of the StackReg/TurboReg plugins, to napari as a proper plugin. This will provide the excellent functionality of the original StackReg/TurboReg plugins to the napari community.


Principal Investigator
Gregor Lichtner, PhD
Gregor Lichtner, PhD